Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792773.1_cds_XP_016514335.1_2599
CDS Infomation

[gene=LOC107831118] [db_xref=GeneID:107831118] [protein=zinc finger MYM-type protein 1-like] [protein_id=XP_016514335.1] [location=15997..17541] [gbkey=CDS]
Sequence

ATGGAAACAGTTAAATGTATCATTGAGGATTTAAATAATGATCACTTTTCTATATTAATT
GATGAATCTCGTGATGTATCATGTAAGGAGCAAATGGCTATTGTTTTGCAGTATGTTGAT
AGAAGGGGAAGTGTGATAGAACGATTTATTGGTATTGTTCATGTTCGTGAAACTACTGCT
TTGTCTCTAAAGAATGGAATTGTTGGTTTACTTGCTCAACATTCTTTAAGTCCATCTTTC
ATACGTGGACAATGTTACGATGGAGCAAGCAATATGCAAGGTGATATAAATAGGCTTAAA
ATCTTGATGCAAAAAGAAAGTAAAGTTGTTCATTCTATTCATTATTTTGCTCATCAACTT
CAACTAATTCTTGTTGCGGTTTCTAAAAGATGTGATGAAGTGCAAGAACTTTTATTAGTT
GTTTCTGATATATTAAATATGGTGGGATCTTCTTTCAAACGTAGAGATGAACTTCGTGAA
TCTCAAGCAGAAGAAATTGAAGAAGCATTACGTAAAGGTGAGCTTGAAACAGGAAGGGGC
TTAAATCAAGAATTAGGTCTTGCTAGAGCTGGTGATACTCTATGGGGCTCTCACTACAAA
TCCTTTAACAATTTTATTCTTATGTTTGGCCTTATCATTGATGTACTTGATGCTATTGCT
ATTAATGCACGTTTTGACGAAAAGTGTAAGGCAAAGGGATACCTTAAAGCATGTTTAACA
TTTGAAGTTGTCTTCATGTTGCATTTTATGCGCACTATTTTAGCAATCACAAATGAGCTT
AATGTTGCCTTCCAAAAGAAGGAGCAAGATATTGCAAATGTTATGATACTTGTTAGAGTG
GCAAAAGATCAGTTGCAACGTCTAAGAGAGGATGGTTGGGCTTCACTTATTGATGAGGTA
TCTAAGTTTTGCATCAAATATGACATATTGATACCTAACTTTGATGAGCCTTATGTTATC
CTTGGAAGATCACGTCATAGAGTTGCAGAGTACAATAATTTACATCACTACCATGTTGTA
GCATTCTGTAAAACTATTGATTGGCAATTTCAAGAACTCAATAACCGCTTTGATGAGGTG
ACAACTGAATTGCTTCTTGGAGTTGCTTGCTTGAACCCAGTTAACTCCTTTTCAAGCTTT
GACATTGAAAAGATATTGAGATTAGCTAAGCTATATCCTGATGATTTTGATAAATACTCT
ATAGTTGACCTTCGTTTTCAGCTTGAGAATTACATTGTCGATGTCAGAGATCATGATAAA
AGGTTTTCCGCTCTTAAGGGACTTGGTGATCTTTCTAAGAAACTAGTAGAAACAAAGAAG
CATGGGACTTATCCTCTTGTGTTCCGGCTAGTGAAATTTGCTTTACTTTTGCTAGTTGCT
ACAGCTACGGTTGAAAGAGCTTTCTCGACAATGAAGTTGATTAAGTCTGACTTACGAAAT
CGAATGGATGATGAGCTTTTGAGTGGTTGTTTAGTGCCTTATATAGAAAAAAAGTATTTA
GTAATATTTCTAATGAGGCTATTGTGGATACATTTCAAAACATGA

Peptide Sequence

PEP ID

XP_016514335.1
PEP Infomation

PREDICTED: zinc finger MYM-type protein 1-like [Nicotiana tabacum]
Sequence

METVKCIIEDLNNDHFSILIDESRDVSCKEQMAIVLQYVDRRGSVIERFIGIVHVRETTA
LSLKNGIVGLLAQHSLSPSFIRGQCYDGASNMQGDINRLKILMQKESKVVHSIHYFAHQL
QLILVAVSKRCDEVQELLLVVSDILNMVGSSFKRRDELRESQAEEIEEALRKGELETGRG
LNQELGLARAGDTLWGSHYKSFNNFILMFGLIIDVLDAIAINARFDEKCKAKGYLKACLT
FEVVFMLHFMRTILAITNELNVAFQKKEQDIANVMILVRVAKDQLQRLREDGWASLIDEV
SKFCIKYDILIPNFDEPYVILGRSRHRVAEYNNLHHYHVVAFCKTIDWQFQELNNRFDEV
TTELLLGVACLNPVNSFSSFDIEKILRLAKLYPDDFDKYSIVDLRFQLENYIVDVRDHDK
RFSALKGLGDLSKKLVETKKHGTYPLVFRLVKFALLLLVATATVERAFSTMKLIKSDLRN
RMDDELLSGCLVPYIEKKYLVIFLMRLLWIHFKT

Transcript Sequence

Gene sequence data has not been registered.